/EXTERNAL BLUEPRINT/K011972_K011976_K012000_K012001_4_lane_gembs/EXTERNAL-K012000_1894942_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 35067462 | 100.00 % | 17533731 | 100.00 % | 17533731 | 100.00 % |
| General Reads | 24750265 | 70.58 % | 12476644 | 71.16 % | 12273621 | 70.00 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10317191 | 29.42 % | 5057084 | 28.84 % | 5260107 | 30.00 % |
| Bisulfite_reads C2T | 12772076 | 36.42 % | 6435774 | 36.71 % | 6336302 | 36.14 % |
| Bisulfite_reads G2A | 11978195 | 34.16 % | 6040873 | 34.45 % | 5937322 | 33.86 % |
| Concept | Value |
|---|---|
| Unique Fragments | 9304239 |
| Average Unique | 53.06 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 923842724 | 34.21 % | 351071347 | 26.00 % | 572771377 | 42.42 % |
| Base Counts Overall C | 406967704 | 15.07 % | 69473132 | 5.15 % | 337494572 | 25.00 % |
| Base Counts Overall G | 419854490 | 15.55 % | 343234373 | 25.42 % | 76620117 | 5.68 % |
| Base Counts Overall T | 913988862 | 33.85 % | 568660552 | 42.12 % | 345328310 | 25.58 % |
| Base Counts Overall N | 35540794 | 1.32 % | 17657883 | 1.31 % | 17882911 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 11512341 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 17533731 |
| 76 | 17533731 |
| Insert Size Histogram |
|---|
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