/EXTERNAL BLUEPRINT/K011972_K011976_K012000_K012001_4_lane_gembs/EXTERNAL-K012001_1894943_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 74125228 | 100.00 % | 37062614 | 100.00 % | 37062614 | 100.00 % |
| General Reads | 56187169 | 75.80 % | 28339760 | 76.46 % | 27847409 | 75.14 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 17938053 | 24.20 % | 8722851 | 23.54 % | 9215202 | 24.86 % |
| Bisulfite_reads C2T | 28966993 | 39.08 % | 14605055 | 39.41 % | 14361938 | 38.75 % |
| Bisulfite_reads G2A | 27220182 | 36.72 % | 13734708 | 37.06 % | 13485474 | 36.39 % |
| Concept | Value |
|---|---|
| Unique Fragments | 21412152 |
| Average Unique | 57.77 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1821115583 | 31.91 % | 790197676 | 27.69 % | 1030917907 | 36.12 % |
| Base Counts Overall C | 985154524 | 17.26 % | 332693582 | 11.66 % | 652460942 | 22.86 % |
| Base Counts Overall G | 1012662835 | 17.74 % | 663193088 | 23.24 % | 349469747 | 12.25 % |
| Base Counts Overall T | 1813618062 | 31.78 % | 1030415621 | 36.11 % | 783202441 | 27.44 % |
| Base Counts Overall N | 75091552 | 1.32 % | 37321311 | 1.31 % | 37770241 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 26256605 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 37062614 |
| 76 | 37062614 |
| Insert Size Histogram |
|---|
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