/EXTERNAL BLUEPRINT/K010419_K010420_K010421_K010422_K010423_K010424_K010425_K010426_K010427_K010428_K010429_11_lane_gembs/EXTERNAL-K010421_1798663_2
BACK
SAMPLE K010419_K010420_K010421_K010422_K010423_K010424_K010425_K010426_K010427_K010428_K010429_11_lane_gembs LANE EXTERNAL-K010421_1798663_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 22650722 | 100.00 % | 11325361 | 100.00 % | 11325361 | 100.00 % |
| General Reads | 18277827 | 80.69 % | 9235094 | 81.54 % | 9042733 | 79.84 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 26 | 0.00 % | 13 | 0.00 % | 13 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4372869 | 19.31 % | 2090254 | 18.46 % | 2282615 | 20.15 % |
| Bisulfite_reads C2T | 9447008 | 41.71 % | 4771611 | 42.13 % | 4675397 | 41.28 % |
| Bisulfite_reads G2A | 8830845 | 38.99 % | 4463496 | 39.41 % | 4367349 | 38.56 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 7093727 |
| Average Unique | 62.64 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 572788989 | 33.27 % | 228126000 | 26.50 % | 344662989 | 40.04 % |
| Base Counts Overall C | 267726316 | 15.55 % | 60297245 | 7.01 % | 207429071 | 24.10 % |
| Base Counts Overall G | 283448509 | 16.47 % | 214503754 | 24.92 % | 68944755 | 8.01 % |
| Base Counts Overall T | 573624142 | 33.32 % | 346342095 | 40.24 % | 227282047 | 26.41 % |
| Base Counts Overall N | 23866916 | 1.39 % | 11458342 | 1.33 % | 12408574 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 8781040 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 11325361 |
| 75 | 11325361 |
Insert Size Plot
| Insert Size Histogram |
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