/EXTERNAL BLUEPRINT/K010419_K010420_K010421_K010422_K010423_K010424_K010425_K010426_K010427_K010428_K010429_11_lane_gembs/EXTERNAL-K010424_1798666_2
BACK
SAMPLE K010419_K010420_K010421_K010422_K010423_K010424_K010425_K010426_K010427_K010428_K010429_11_lane_gembs LANE EXTERNAL-K010424_1798666_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 20381908 | 100.00 % | 10190954 | 100.00 % | 10190954 | 100.00 % |
| General Reads | 13282143 | 65.17 % | 6704437 | 65.79 % | 6577706 | 64.54 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7099765 | 34.83 % | 3486517 | 34.21 % | 3613248 | 35.46 % |
| Bisulfite_reads C2T | 6860641 | 33.66 % | 3461576 | 33.97 % | 3399065 | 33.35 % |
| Bisulfite_reads G2A | 6421502 | 31.51 % | 3242861 | 31.82 % | 3178641 | 31.19 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5146507 |
| Average Unique | 50.50 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 478227738 | 30.87 % | 201753631 | 26.05 % | 276474107 | 35.70 % |
| Base Counts Overall C | 277523338 | 17.92 % | 90852645 | 11.73 % | 186670693 | 24.10 % |
| Base Counts Overall G | 293022160 | 18.92 % | 192875978 | 24.90 % | 100146182 | 12.93 % |
| Base Counts Overall T | 478772554 | 30.91 % | 278719971 | 35.99 % | 200052583 | 25.83 % |
| Base Counts Overall N | 21479218 | 1.39 % | 10310279 | 1.33 % | 11168939 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6377595 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 10190954 |
| 75 | 10190954 |
Insert Size Plot
| Insert Size Histogram |
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