/EXTERNAL BLUEPRINT/K010419_K010420_K010421_K010422_K010423_K010424_K010425_K010426_K010427_K010428_K010429_11_lane_gembs/EXTERNAL-K010426_1798668_2
BACK
SAMPLE K010419_K010420_K010421_K010422_K010423_K010424_K010425_K010426_K010427_K010428_K010429_11_lane_gembs LANE EXTERNAL-K010426_1798668_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 20053574 | 100.00 % | 10026787 | 100.00 % | 10026787 | 100.00 % |
| General Reads | 15298295 | 76.29 % | 7725120 | 77.04 % | 7573175 | 75.53 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9 | 0.00 % | 4 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4755270 | 23.71 % | 2301663 | 22.96 % | 2453607 | 24.47 % |
| Bisulfite_reads C2T | 7886580 | 39.33 % | 3981129 | 39.70 % | 3905451 | 38.95 % |
| Bisulfite_reads G2A | 7411724 | 36.96 % | 3743995 | 37.34 % | 3667729 | 36.58 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5961387 |
| Average Unique | 59.45 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 500466723 | 32.84 % | 200936926 | 26.37 % | 299529797 | 39.31 % |
| Base Counts Overall C | 244051522 | 16.01 % | 57191517 | 7.51 % | 186860005 | 24.52 % |
| Base Counts Overall G | 256569360 | 16.83 % | 191721078 | 25.16 % | 64848282 | 8.51 % |
| Base Counts Overall T | 501853941 | 32.93 % | 302042726 | 39.64 % | 199811215 | 26.22 % |
| Base Counts Overall N | 21130078 | 1.39 % | 10143565 | 1.33 % | 10986513 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 7358829 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 10026787 |
| 75 | 10026787 |
Insert Size Plot
| Insert Size Histogram |
 |