/EXTERNAL BLUEPRINT/K012013_K012014_K012015_K012016_K012017_K012018_K012019_K012020_K012021_9_lane_gembs/EXTERNAL-K012013_1894955_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 108127864 | 100.00 % | 54063932 | 100.00 % | 54063932 | 100.00 % |
| General Reads | 100263685 | 92.73 % | 50538327 | 93.48 % | 49725358 | 91.98 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 18 | 0.00 % | 9 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7864161 | 7.27 % | 3525596 | 6.52 % | 4338565 | 8.02 % |
| Bisulfite_reads C2T | 51866788 | 47.97 % | 26138800 | 48.35 % | 25727988 | 47.59 % |
| Bisulfite_reads G2A | 48396915 | 44.76 % | 24399536 | 45.13 % | 23997379 | 44.39 % |
| Concept | Value |
|---|---|
| Unique Fragments | 38630385 |
| Average Unique | 71.45 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2914171518 | 35.00 % | 1150387894 | 27.63 % | 1763783624 | 42.37 % |
| Base Counts Overall C | 1210187903 | 14.54 % | 224459308 | 5.39 % | 985728595 | 23.68 % |
| Base Counts Overall G | 1253323226 | 15.05 % | 1013394567 | 24.34 % | 239928659 | 5.76 % |
| Base Counts Overall T | 2839418437 | 34.10 % | 1720265635 | 41.32 % | 1119152802 | 26.88 % |
| Base Counts Overall N | 108744444 | 1.31 % | 54415360 | 1.31 % | 54329084 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 47527737 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 54063932 |
| 76 | 54063932 |
| Insert Size Histogram |
|---|
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