/EXTERNAL BLUEPRINT/K012013_K012014_K012015_K012016_K012017_K012018_K012019_K012020_K012021_9_lane_gembs/EXTERNAL-K012015_1894957_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18617644 | 100.00 % | 9308822 | 100.00 % | 9308822 | 100.00 % |
| General Reads | 9952671 | 53.46 % | 5017698 | 53.90 % | 4934973 | 53.01 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 13 | 0.00 % | 7 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8664960 | 46.54 % | 4291117 | 46.10 % | 4373843 | 46.99 % |
| Bisulfite_reads C2T | 5132193 | 27.57 % | 2586226 | 27.78 % | 2545967 | 27.35 % |
| Bisulfite_reads G2A | 4820491 | 25.89 % | 2431479 | 26.12 % | 2389012 | 25.66 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3826087 |
| Average Unique | 41.10 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 404318102 | 28.20 % | 192915159 | 26.91 % | 211402943 | 29.49 % |
| Base Counts Overall C | 298189033 | 20.80 % | 129565519 | 18.08 % | 168623514 | 23.53 % |
| Base Counts Overall G | 307834178 | 21.47 % | 172671026 | 24.09 % | 135163152 | 18.86 % |
| Base Counts Overall T | 404492851 | 28.22 % | 212257345 | 29.61 % | 192235506 | 26.82 % |
| Base Counts Overall N | 18724424 | 1.31 % | 9370245 | 1.31 % | 9354179 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4740484 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9308822 |
| 76 | 9308822 |
| Insert Size Histogram |
|---|
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