/EXTERNAL BLUEPRINT/K012013_K012014_K012015_K012016_K012017_K012018_K012019_K012020_K012021_9_lane_gembs/EXTERNAL-K012016_1894958_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14908568 | 100.00 % | 7454284 | 100.00 % | 7454284 | 100.00 % |
| General Reads | 7962717 | 53.41 % | 4013042 | 53.84 % | 3949675 | 52.99 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 11 | 0.00 % | 5 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6945840 | 46.59 % | 3441237 | 46.16 % | 3504603 | 47.01 % |
| Bisulfite_reads C2T | 4108918 | 27.56 % | 2070020 | 27.77 % | 2038898 | 27.35 % |
| Bisulfite_reads G2A | 3853810 | 25.85 % | 1943027 | 26.07 % | 1910783 | 25.63 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3086289 |
| Average Unique | 41.40 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 313090705 | 27.27 % | 150147347 | 26.16 % | 162943358 | 28.39 % |
| Base Counts Overall C | 249504500 | 21.73 % | 112906653 | 19.67 % | 136597847 | 23.80 % |
| Base Counts Overall G | 256218166 | 22.32 % | 139719583 | 24.34 % | 116498583 | 20.30 % |
| Base Counts Overall T | 314150911 | 27.37 % | 163704316 | 28.52 % | 150446595 | 26.21 % |
| Base Counts Overall N | 14995454 | 1.31 % | 7501969 | 1.31 % | 7493485 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3798564 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7454284 |
| 76 | 7454284 |
| Insert Size Histogram |
|---|
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