/EXTERNAL BLUEPRINT/K012013_K012014_K012015_K012016_K012017_K012018_K012019_K012020_K012021_9_lane_gembs/EXTERNAL-K012017_1894959_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17100340 | 100.00 % | 8550170 | 100.00 % | 8550170 | 100.00 % |
| General Reads | 9540266 | 55.79 % | 4806316 | 56.21 % | 4733950 | 55.37 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7560066 | 44.21 % | 3743850 | 43.79 % | 3816216 | 44.63 % |
| Bisulfite_reads C2T | 4909154 | 28.71 % | 2472255 | 28.91 % | 2436899 | 28.50 % |
| Bisulfite_reads G2A | 4631120 | 27.08 % | 2334065 | 27.30 % | 2297055 | 26.87 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3724127 |
| Average Unique | 43.56 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 358325474 | 27.21 % | 175055760 | 26.59 % | 183269714 | 27.84 % |
| Base Counts Overall C | 287181031 | 21.81 % | 136620009 | 20.75 % | 150561022 | 22.87 % |
| Base Counts Overall G | 294675919 | 22.38 % | 153635600 | 23.34 % | 141040319 | 21.42 % |
| Base Counts Overall T | 359347538 | 27.29 % | 184447215 | 28.02 % | 174900323 | 26.57 % |
| Base Counts Overall N | 17196218 | 1.31 % | 8604506 | 1.31 % | 8591712 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4574873 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8550170 |
| 76 | 8550170 |
| Insert Size Histogram |
|---|
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