/EXTERNAL BLUEPRINT/K012013_K012014_K012015_K012016_K012017_K012018_K012019_K012020_K012021_9_lane_gembs/EXTERNAL-K012019_1894961_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16610032 | 100.00 % | 8305016 | 100.00 % | 8305016 | 100.00 % |
| General Reads | 9650160 | 58.10 % | 4861528 | 58.54 % | 4788632 | 57.66 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6959864 | 41.90 % | 3443484 | 41.46 % | 3516380 | 42.34 % |
| Bisulfite_reads C2T | 4984048 | 30.01 % | 2509787 | 30.22 % | 2474261 | 29.79 % |
| Bisulfite_reads G2A | 4666120 | 28.09 % | 2351745 | 28.32 % | 2314375 | 27.87 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3654384 |
| Average Unique | 44.00 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 373672538 | 29.22 % | 169234566 | 26.46 % | 204437972 | 31.97 % |
| Base Counts Overall C | 254495178 | 19.90 % | 100941698 | 15.78 % | 153553480 | 24.01 % |
| Base Counts Overall G | 262135899 | 20.50 % | 157205095 | 24.58 % | 104930804 | 16.41 % |
| Base Counts Overall T | 371964651 | 29.08 % | 203746204 | 31.86 % | 168218447 | 26.31 % |
| Base Counts Overall N | 16704198 | 1.31 % | 8358669 | 1.31 % | 8345529 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4535437 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8305016 |
| 76 | 8305016 |
| Insert Size Histogram |
|---|
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