/EXTERNAL BLUEPRINT/K012013_K012014_K012015_K012016_K012017_K012018_K012019_K012020_K012021_9_lane_gembs/EXTERNAL-K012020_1894962_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 43733072 | 100.00 % | 21866536 | 100.00 % | 21866536 | 100.00 % |
| General Reads | 28063656 | 64.17 % | 14158261 | 64.75 % | 13905395 | 63.59 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 23 | 0.00 % | 13 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15669393 | 35.83 % | 7708262 | 35.25 % | 7961131 | 36.41 % |
| Bisulfite_reads C2T | 14500885 | 33.16 % | 7313402 | 33.45 % | 7187483 | 32.87 % |
| Bisulfite_reads G2A | 13562794 | 31.01 % | 6844872 | 31.30 % | 6717922 | 30.72 % |
| Concept | Value |
|---|---|
| Unique Fragments | 10660986 |
| Average Unique | 48.75 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1052876361 | 31.27 % | 463013488 | 27.50 % | 589862873 | 35.03 % |
| Base Counts Overall C | 602240571 | 17.88 % | 211095504 | 12.54 % | 391145067 | 23.23 % |
| Base Counts Overall G | 620323253 | 18.42 % | 400291660 | 23.77 % | 220031593 | 13.07 % |
| Base Counts Overall T | 1048028169 | 31.12 % | 587315878 | 34.88 % | 460712291 | 27.36 % |
| Base Counts Overall N | 43978190 | 1.31 % | 22006742 | 1.31 % | 21971448 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 13241342 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 21866536 |
| 76 | 21866536 |
| Insert Size Histogram |
|---|
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