/EXTERNAL BLUEPRINT/K012013_K012014_K012015_K012016_K012017_K012018_K012019_K012020_K012021_9_lane_gembs/EXTERNAL-K012021_1894963_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 37776244 | 100.00 % | 18888122 | 100.00 % | 18888122 | 100.00 % |
| General Reads | 27488239 | 72.77 % | 13861709 | 73.39 % | 13626530 | 72.14 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 37 | 0.00 % | 17 | 0.00 % | 20 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10287968 | 27.23 % | 5026396 | 26.61 % | 5261572 | 27.86 % |
| Bisulfite_reads C2T | 14212505 | 37.62 % | 7164891 | 37.93 % | 7047614 | 37.31 % |
| Bisulfite_reads G2A | 13275771 | 35.14 % | 6696835 | 35.46 % | 6578936 | 34.83 % |
| Concept | Value |
|---|---|
| Unique Fragments | 10538465 |
| Average Unique | 55.79 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 915910376 | 31.49 % | 389852359 | 26.81 % | 526058017 | 36.17 % |
| Base Counts Overall C | 515455991 | 17.72 % | 167549232 | 11.52 % | 347906759 | 23.92 % |
| Base Counts Overall G | 531006969 | 18.26 % | 356762008 | 24.53 % | 174244961 | 11.98 % |
| Base Counts Overall T | 908408650 | 31.23 % | 521214712 | 35.84 % | 387193938 | 26.62 % |
| Base Counts Overall N | 37988802 | 1.31 % | 19007083 | 1.31 % | 18981719 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 13041564 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 18888122 |
| 76 | 18888122 |
| Insert Size Histogram |
|---|
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