/EXTERNAL BLUEPRINT/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs/EXTERNAL-K010451_1798693_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 111507868 | 100.00 % | 55753934 | 100.00 % | 55753934 | 100.00 % |
| General Reads | 106751966 | 95.73 % | 53938263 | 96.74 % | 52813703 | 94.73 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9 | 0.00 % | 5 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4755893 | 4.27 % | 1815666 | 3.26 % | 2940227 | 5.27 % |
| Bisulfite_reads C2T | 55250378 | 49.55 % | 27908319 | 50.06 % | 27342059 | 49.04 % |
| Bisulfite_reads G2A | 51501597 | 46.19 % | 26029949 | 46.69 % | 25471648 | 45.69 % |
| Concept | Value |
|---|---|
| Unique Fragments | 40547011 |
| Average Unique | 72.72 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 3075381197 | 36.29 % | 1194917164 | 28.20 % | 1880464033 | 44.38 % |
| Base Counts Overall C | 1098616902 | 12.96 % | 106719288 | 2.52 % | 991897614 | 23.41 % |
| Base Counts Overall G | 1165651002 | 13.75 % | 1025368544 | 24.20 % | 140282458 | 3.31 % |
| Base Counts Overall T | 3004973641 | 35.46 % | 1854376103 | 43.76 % | 1150597538 | 27.15 % |
| Base Counts Overall N | 129975226 | 1.53 % | 55917885 | 1.32 % | 74057341 | 1.75 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 50557459 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 55753934 |
| 75 | 55753934 |
| Insert Size Histogram |
|---|
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