/EXTERNAL BLUEPRINT/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs/EXTERNAL-K010452_1798694_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14522548 | 100.00 % | 7261274 | 100.00 % | 7261274 | 100.00 % |
| General Reads | 4686907 | 32.27 % | 2366462 | 32.59 % | 2320445 | 31.96 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9835639 | 67.73 % | 4894811 | 67.41 % | 4940828 | 68.04 % |
| Bisulfite_reads C2T | 2417674 | 16.65 % | 1219284 | 16.79 % | 1198390 | 16.50 % |
| Bisulfite_reads G2A | 2269235 | 15.63 % | 1147179 | 15.80 % | 1122056 | 15.45 % |
| Concept | Value |
|---|---|
| Unique Fragments | 1756372 |
| Average Unique | 24.19 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 348904197 | 31.61 % | 156151044 | 28.30 % | 192753153 | 34.93 % |
| Base Counts Overall C | 205478532 | 18.62 % | 100755119 | 18.26 % | 104723413 | 18.98 % |
| Base Counts Overall G | 243565068 | 22.07 % | 124940123 | 22.64 % | 118624945 | 21.50 % |
| Base Counts Overall T | 288608677 | 26.15 % | 162726295 | 29.49 % | 125882382 | 22.81 % |
| Base Counts Overall N | 17157174 | 1.55 % | 7284243 | 1.32 % | 9872931 | 1.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2214061 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 7261274 |
| 75 | 7261274 |
| Insert Size Histogram |
|---|
 |