/EXTERNAL BLUEPRINT/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs/EXTERNAL-K010453_1798695_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17060714 | 100.00 % | 8530357 | 100.00 % | 8530357 | 100.00 % |
| General Reads | 13694735 | 80.27 % | 6942442 | 81.39 % | 6752293 | 79.16 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12 | 0.00 % | 6 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3365967 | 19.73 % | 1587909 | 18.61 % | 1778058 | 20.84 % |
| Bisulfite_reads C2T | 7069554 | 41.44 % | 3582603 | 42.00 % | 3486951 | 40.88 % |
| Bisulfite_reads G2A | 6625193 | 38.83 % | 3359845 | 39.39 % | 3265348 | 38.28 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5227373 |
| Average Unique | 61.28 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 431839260 | 33.31 % | 178793587 | 27.58 % | 253045673 | 39.03 % |
| Base Counts Overall C | 200085447 | 15.43 % | 46651742 | 7.20 % | 153433705 | 23.67 % |
| Base Counts Overall G | 215846973 | 16.65 % | 160262375 | 24.72 % | 55584598 | 8.57 % |
| Base Counts Overall T | 428913594 | 33.08 % | 254044233 | 39.19 % | 174869361 | 26.97 % |
| Base Counts Overall N | 19928990 | 1.54 % | 8555195 | 1.32 % | 11373795 | 1.75 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6538254 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 8530357 |
| 75 | 8530357 |
| Insert Size Histogram |
|---|
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