/EXTERNAL BLUEPRINT/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs/EXTERNAL-K010455_1798697_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16840830 | 100.00 % | 8420415 | 100.00 % | 8420415 | 100.00 % |
| General Reads | 13456870 | 79.91 % | 6822698 | 81.03 % | 6634172 | 78.79 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9 | 0.00 % | 5 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3383951 | 20.09 % | 1597712 | 18.97 % | 1786239 | 21.21 % |
| Bisulfite_reads C2T | 6963939 | 41.35 % | 3529610 | 41.92 % | 3434329 | 40.79 % |
| Bisulfite_reads G2A | 6492940 | 38.55 % | 3293093 | 39.11 % | 3199847 | 38.00 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5131397 |
| Average Unique | 60.94 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 430843186 | 33.66 % | 174330502 | 27.24 % | 256512684 | 40.08 % |
| Base Counts Overall C | 192344870 | 15.03 % | 39190645 | 6.12 % | 153154225 | 23.93 % |
| Base Counts Overall G | 208867172 | 16.32 % | 159595196 | 24.94 % | 49271976 | 7.70 % |
| Base Counts Overall T | 428166325 | 33.45 % | 258390162 | 40.38 % | 169776163 | 26.53 % |
| Base Counts Overall N | 19681527 | 1.54 % | 8445035 | 1.32 % | 11236492 | 1.76 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6418037 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 8420415 |
| 75 | 8420415 |
| Insert Size Histogram |
|---|
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