/EXTERNAL BLUEPRINT/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs/EXTERNAL-K010456_1798698_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 12973970 | 100.00 % | 6486985 | 100.00 % | 6486985 | 100.00 % |
| General Reads | 10177210 | 78.44 % | 5174831 | 79.77 % | 5002379 | 77.11 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2796760 | 21.56 % | 1312154 | 20.23 % | 1484606 | 22.89 % |
| Bisulfite_reads C2T | 5258941 | 40.53 % | 2673151 | 41.21 % | 2585790 | 39.86 % |
| Bisulfite_reads G2A | 4918269 | 37.91 % | 2501680 | 38.56 % | 2416589 | 37.25 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3885641 |
| Average Unique | 59.90 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 324476720 | 32.91 % | 134962029 | 27.38 % | 189514691 | 38.44 % |
| Base Counts Overall C | 155343392 | 15.75 % | 38798638 | 7.87 % | 116544754 | 23.64 % |
| Base Counts Overall G | 166235534 | 16.86 % | 121021285 | 24.55 % | 45214249 | 9.17 % |
| Base Counts Overall T | 324803867 | 32.94 % | 191722646 | 38.89 % | 133081221 | 26.99 % |
| Base Counts Overall N | 15162207 | 1.54 % | 6506262 | 1.32 % | 8655945 | 1.76 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4846850 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 6486985 |
| 75 | 6486985 |
| Insert Size Histogram |
|---|
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