/EXTERNAL BLUEPRINT/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs/EXTERNAL-K010457_1798699_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16697746 | 100.00 % | 8348873 | 100.00 % | 8348873 | 100.00 % |
| General Reads | 13923861 | 83.39 % | 7059955 | 84.56 % | 6863906 | 82.21 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2773885 | 16.61 % | 1288918 | 15.44 % | 1484967 | 17.79 % |
| Bisulfite_reads C2T | 7194273 | 43.09 % | 3646389 | 43.68 % | 3547884 | 42.50 % |
| Bisulfite_reads G2A | 6729588 | 40.30 % | 3413566 | 40.89 % | 3316022 | 39.72 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5309398 |
| Average Unique | 63.59 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 426782808 | 33.63 % | 173531779 | 27.35 % | 253251029 | 39.91 % |
| Base Counts Overall C | 191765318 | 15.11 % | 38545774 | 6.07 % | 153219544 | 24.15 % |
| Base Counts Overall G | 205806200 | 16.22 % | 158812586 | 25.03 % | 46993614 | 7.41 % |
| Base Counts Overall T | 425163737 | 33.50 % | 255251370 | 40.23 % | 169912367 | 26.78 % |
| Base Counts Overall N | 19510633 | 1.54 % | 8372839 | 1.32 % | 11137794 | 1.76 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6647331 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 8348873 |
| 75 | 8348873 |
| Insert Size Histogram |
|---|
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