/EXTERNAL BLUEPRINT/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs/EXTERNAL-K010458_1798700_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14399004 | 100.00 % | 7199502 | 100.00 % | 7199502 | 100.00 % |
| General Reads | 12069613 | 83.82 % | 6148334 | 85.40 % | 5921279 | 82.25 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2329391 | 16.18 % | 1051168 | 14.60 % | 1278223 | 17.75 % |
| Bisulfite_reads C2T | 6232006 | 43.28 % | 3173003 | 44.07 % | 3059003 | 42.49 % |
| Bisulfite_reads G2A | 5837607 | 40.54 % | 2975331 | 41.33 % | 2862276 | 39.76 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4588265 |
| Average Unique | 63.73 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 359848763 | 32.88 % | 153959278 | 28.14 % | 205889485 | 37.63 % |
| Base Counts Overall C | 176215461 | 16.10 % | 52749776 | 9.64 % | 123465685 | 22.56 % |
| Base Counts Overall G | 189295766 | 17.30 % | 129493210 | 23.67 % | 59802556 | 10.93 % |
| Base Counts Overall T | 352159271 | 32.18 % | 203739967 | 37.24 % | 148419304 | 27.13 % |
| Base Counts Overall N | 16805043 | 1.54 % | 7219921 | 1.32 % | 9585122 | 1.75 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5726272 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 7199502 |
| 75 | 7199502 |
| Insert Size Histogram |
|---|
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