/EXTERNAL BLUEPRINT/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs/EXTERNAL-K010459_1798701_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 33283806 | 100.00 % | 16641903 | 100.00 % | 16641903 | 100.00 % |
| General Reads | 30316461 | 91.08 % | 15390869 | 92.48 % | 14925592 | 89.69 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2967345 | 8.92 % | 1251034 | 7.52 % | 1716311 | 10.31 % |
| Bisulfite_reads C2T | 15661080 | 47.05 % | 7948670 | 47.76 % | 7712410 | 46.34 % |
| Bisulfite_reads G2A | 14655381 | 44.03 % | 7442199 | 44.72 % | 7213182 | 43.34 % |
| Concept | Value |
|---|---|
| Unique Fragments | 11108449 |
| Average Unique | 66.75 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 914247833 | 36.14 % | 361564922 | 28.59 % | 552682911 | 43.70 % |
| Base Counts Overall C | 338643966 | 13.39 % | 43120878 | 3.41 % | 295523088 | 23.37 % |
| Base Counts Overall G | 365303165 | 14.44 % | 309381937 | 24.46 % | 55921228 | 4.42 % |
| Base Counts Overall T | 872444037 | 34.49 % | 534032527 | 42.22 % | 338411510 | 26.76 % |
| Base Counts Overall N | 38930255 | 1.54 % | 16684364 | 1.32 % | 22245891 | 1.76 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 14262873 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 16641903 |
| 75 | 16641903 |
| Insert Size Histogram |
|---|
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