/EXTERNAL BLUEPRINT/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs/EXTERNAL-K010460_1798702_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 38093584 | 100.00 % | 19046792 | 100.00 % | 19046792 | 100.00 % |
| General Reads | 35599312 | 93.45 % | 18030139 | 94.66 % | 17569173 | 92.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2494270 | 6.55 % | 1016652 | 5.34 % | 1477618 | 7.76 % |
| Bisulfite_reads C2T | 18422583 | 48.36 % | 9327178 | 48.97 % | 9095405 | 47.75 % |
| Bisulfite_reads G2A | 17176731 | 45.09 % | 8702962 | 45.69 % | 8473769 | 44.49 % |
| Concept | Value |
|---|---|
| Unique Fragments | 13555148 |
| Average Unique | 71.17 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1029981939 | 35.58 % | 404340017 | 27.93 % | 625641922 | 43.22 % |
| Base Counts Overall C | 388203015 | 13.41 % | 42365206 | 2.93 % | 345837809 | 23.89 % |
| Base Counts Overall G | 413904712 | 14.30 % | 358081918 | 24.74 % | 55822794 | 3.86 % |
| Base Counts Overall T | 1018557001 | 35.18 % | 623667148 | 43.08 % | 394889853 | 27.28 % |
| Base Counts Overall N | 44465717 | 1.54 % | 19101903 | 1.32 % | 25363814 | 1.75 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 16960332 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 19046792 |
| 75 | 19046792 |
| Insert Size Histogram |
|---|
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