/EXTERNAL BLUEPRINT/methylation/K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs
BACK
SAMPLE K010451_K010452_K010453_K010454_K010455_K010456_K010457_K010458_K010459_K010460_10_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
21892903 |
586274 |
2.68 % |
| NonRefCpG |
870274 |
2155 |
0.25 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
4445709 |
13.72 % |
71834 |
4.73 % |
357944 |
30.94 % |
1091 |
11.16 % |
| Intermediate (0.3-0.7) |
10231517 |
31.58 % |
264730 |
17.43 % |
411375 |
35.56 % |
2132 |
21.80 % |
| Methylated (0.7-1) |
17719034 |
54.69 % |
1182340 |
77.84 % |
387471 |
33.50 % |
6555 |
67.04 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.730 |
|
0.870 |
|
0.520 |
|
0.830 |
|