/EXTERNAL BLUEPRINT/K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs/EXTERNAL-K010471_1798713_2
BACK
SAMPLE K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs LANE EXTERNAL-K010471_1798713_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 124829600 | 100.00 % | 62414800 | 100.00 % | 62414800 | 100.00 % |
| General Reads | 119164829 | 95.46 % | 60125858 | 96.33 % | 59038971 | 94.59 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 18 | 0.00 % | 9 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5664753 | 4.54 % | 2288933 | 3.67 % | 3375820 | 5.41 % |
| Bisulfite_reads C2T | 61663940 | 49.40 % | 31105127 | 49.84 % | 30558813 | 48.96 % |
| Bisulfite_reads G2A | 57500907 | 46.06 % | 29020740 | 46.50 % | 28480167 | 45.63 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 45402062 |
| Average Unique | 72.74 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 3439201754 | 36.25 % | 1323340753 | 27.90 % | 2115861001 | 44.61 % |
| Base Counts Overall C | 1241267626 | 13.08 % | 136320562 | 2.87 % | 1104947064 | 23.29 % |
| Base Counts Overall G | 1308162847 | 13.79 % | 1139589126 | 24.02 % | 168573721 | 3.55 % |
| Base Counts Overall T | 3366991305 | 35.49 % | 2080945989 | 43.87 % | 1286045316 | 27.11 % |
| Base Counts Overall N | 131426068 | 1.39 % | 63328370 | 1.34 % | 68097698 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 56245285 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 62414800 |
| 75 | 62414800 |
Insert Size Plot
| Insert Size Histogram |
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