/EXTERNAL BLUEPRINT/K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs/EXTERNAL-K010472_1798714_2
BACK
SAMPLE K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs LANE EXTERNAL-K010472_1798714_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 17733338 | 100.00 % | 8866669 | 100.00 % | 8866669 | 100.00 % |
| General Reads | 14249978 | 80.36 % | 7201355 | 81.22 % | 7048623 | 79.50 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 29 | 0.00 % | 14 | 0.00 % | 15 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3483331 | 19.64 % | 1665300 | 18.78 % | 1818031 | 20.50 % |
| Bisulfite_reads C2T | 7366303 | 41.54 % | 3721705 | 41.97 % | 3644598 | 41.10 % |
| Bisulfite_reads G2A | 6883704 | 38.82 % | 3479664 | 39.24 % | 3404040 | 38.39 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5507456 |
| Average Unique | 62.11 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 450852955 | 33.45 % | 178917909 | 26.55 % | 271935046 | 40.35 % |
| Base Counts Overall C | 207199196 | 15.37 % | 45992974 | 6.83 % | 161206222 | 23.92 % |
| Base Counts Overall G | 220319118 | 16.35 % | 167308971 | 24.83 % | 53010147 | 7.87 % |
| Base Counts Overall T | 450677619 | 33.44 % | 272650231 | 40.46 % | 178027388 | 26.42 % |
| Base Counts Overall N | 18684800 | 1.39 % | 8996759 | 1.34 % | 9688041 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6836213 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 8866669 |
| 75 | 8866669 |
Insert Size Plot
| Insert Size Histogram |
 |