/EXTERNAL BLUEPRINT/K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs/EXTERNAL-K010473_1798715_2
BACK
SAMPLE K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs LANE EXTERNAL-K010473_1798715_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 18132134 | 100.00 % | 9066067 | 100.00 % | 9066067 | 100.00 % |
| General Reads | 12568438 | 69.32 % | 6362740 | 70.18 % | 6205698 | 68.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 41 | 0.00 % | 23 | 0.00 % | 18 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5563655 | 30.68 % | 2703304 | 29.82 % | 2860351 | 31.55 % |
| Bisulfite_reads C2T | 6500525 | 35.85 % | 3290420 | 36.29 % | 3210105 | 35.41 % |
| Bisulfite_reads G2A | 6067954 | 33.47 % | 3072343 | 33.89 % | 2995611 | 33.04 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4813538 |
| Average Unique | 53.09 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 436577272 | 31.68 % | 183869517 | 26.69 % | 252707755 | 36.68 % |
| Base Counts Overall C | 235602508 | 17.10 % | 72707579 | 10.55 % | 162894929 | 23.64 % |
| Base Counts Overall G | 252877157 | 18.35 % | 170351491 | 24.72 % | 82525666 | 11.98 % |
| Base Counts Overall T | 433886779 | 31.49 % | 252894817 | 36.70 % | 180991962 | 26.27 % |
| Base Counts Overall N | 19098468 | 1.39 % | 9197688 | 1.33 % | 9900780 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 5981565 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 9066067 |
| 75 | 9066067 |
Insert Size Plot
| Insert Size Histogram |
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