/EXTERNAL BLUEPRINT/K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs/EXTERNAL-K010474_1798716_2
BACK
SAMPLE K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs LANE EXTERNAL-K010474_1798716_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 19741726 | 100.00 % | 9870863 | 100.00 % | 9870863 | 100.00 % |
| General Reads | 13119431 | 66.46 % | 6630036 | 67.17 % | 6489395 | 65.74 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 49 | 0.00 % | 22 | 0.00 % | 27 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6622246 | 33.54 % | 3240805 | 32.83 % | 3381441 | 34.26 % |
| Bisulfite_reads C2T | 6786461 | 34.38 % | 3428626 | 34.73 % | 3357835 | 34.02 % |
| Bisulfite_reads G2A | 6333019 | 32.08 % | 3201432 | 32.43 % | 3131587 | 31.73 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5073574 |
| Average Unique | 51.40 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 463441703 | 30.89 % | 196829721 | 26.24 % | 266611982 | 35.54 % |
| Base Counts Overall C | 267789908 | 17.85 % | 89646566 | 11.95 % | 178143342 | 23.75 % |
| Base Counts Overall G | 283832230 | 18.92 % | 184763604 | 24.63 % | 99068626 | 13.21 % |
| Base Counts Overall T | 464532983 | 30.96 % | 268930303 | 35.85 % | 195602680 | 26.07 % |
| Base Counts Overall N | 20774352 | 1.38 % | 10015394 | 1.34 % | 10758958 | 1.43 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6283325 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 9870863 |
| 75 | 9870863 |
Insert Size Plot
| Insert Size Histogram |
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