/EXTERNAL BLUEPRINT/K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs/EXTERNAL-K010475_1798717_2
BACK
SAMPLE K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs LANE EXTERNAL-K010475_1798717_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 17271232 | 100.00 % | 8635616 | 100.00 % | 8635616 | 100.00 % |
| General Reads | 10861241 | 62.89 % | 5501038 | 63.70 % | 5360203 | 62.07 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6409991 | 37.11 % | 3134578 | 36.30 % | 3275413 | 37.93 % |
| Bisulfite_reads C2T | 5708714 | 33.05 % | 2889331 | 33.46 % | 2819383 | 32.65 % |
| Bisulfite_reads G2A | 5152527 | 29.83 % | 2611707 | 30.24 % | 2540820 | 29.42 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4103790 |
| Average Unique | 47.52 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 385840164 | 29.39 % | 179103910 | 27.29 % | 206736254 | 31.50 % |
| Base Counts Overall C | 251523322 | 19.16 % | 97073704 | 14.79 % | 154449618 | 23.53 % |
| Base Counts Overall G | 268961020 | 20.49 % | 160196409 | 24.41 % | 108764611 | 16.57 % |
| Base Counts Overall T | 388123515 | 29.57 % | 211171189 | 32.18 % | 176952326 | 26.96 % |
| Base Counts Overall N | 18165611 | 1.38 % | 8761604 | 1.33 % | 9404007 | 1.43 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 5184711 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 8635616 |
| 75 | 8635616 |
Insert Size Plot
| Insert Size Histogram |
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