/EXTERNAL BLUEPRINT/K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs/EXTERNAL-K010477_1798719_2
BACK
SAMPLE K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs LANE EXTERNAL-K010477_1798719_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 18037974 | 100.00 % | 9018987 | 100.00 % | 9018987 | 100.00 % |
| General Reads | 12736940 | 70.61 % | 6453049 | 71.55 % | 6283891 | 69.67 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 51 | 0.00 % | 26 | 0.00 % | 25 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5300983 | 29.39 % | 2565912 | 28.45 % | 2735071 | 30.33 % |
| Bisulfite_reads C2T | 6571648 | 36.43 % | 3328164 | 36.90 % | 3243484 | 35.96 % |
| Bisulfite_reads G2A | 6165343 | 34.18 % | 3124911 | 34.65 % | 3040432 | 33.71 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4924391 |
| Average Unique | 54.60 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 434304608 | 31.68 % | 179820074 | 26.23 % | 254484534 | 37.13 % |
| Base Counts Overall C | 232857001 | 16.99 % | 70987428 | 10.36 % | 161869573 | 23.62 % |
| Base Counts Overall G | 247467019 | 18.05 % | 167458590 | 24.43 % | 80008429 | 11.67 % |
| Base Counts Overall T | 437273424 | 31.90 % | 258026714 | 37.64 % | 179246710 | 26.15 % |
| Base Counts Overall N | 18983972 | 1.38 % | 9150206 | 1.33 % | 9833766 | 1.43 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6100317 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 9018987 |
| 75 | 9018987 |
Insert Size Plot
| Insert Size Histogram |
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