/EXTERNAL BLUEPRINT/K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs/EXTERNAL-K010480_1798722_2
BACK
SAMPLE K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs LANE EXTERNAL-K010480_1798722_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 36023478 | 100.00 % | 18011739 | 100.00 % | 18011739 | 100.00 % |
| General Reads | 31784080 | 88.23 % | 16056489 | 89.14 % | 15727591 | 87.32 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 17 | 0.00 % | 10 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4239381 | 11.77 % | 1955240 | 10.86 % | 2284141 | 12.68 % |
| Bisulfite_reads C2T | 16415360 | 45.57 % | 8291108 | 46.03 % | 8124252 | 45.11 % |
| Bisulfite_reads G2A | 15368737 | 42.66 % | 7765391 | 43.11 % | 7603346 | 42.21 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 11806977 |
| Average Unique | 65.55 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 978635112 | 35.75 % | 388281342 | 28.36 % | 590353770 | 43.13 % |
| Base Counts Overall C | 381647489 | 13.94 % | 64176193 | 4.69 % | 317471296 | 23.19 % |
| Base Counts Overall G | 407270941 | 14.88 % | 331349241 | 24.21 % | 75921700 | 5.55 % |
| Base Counts Overall T | 932223620 | 34.05 % | 566828279 | 41.41 % | 365395341 | 26.69 % |
| Base Counts Overall N | 38007166 | 1.39 % | 18257109 | 1.33 % | 19750057 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 15026647 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 18011739 |
| 75 | 18011739 |
Insert Size Plot
| Insert Size Histogram |
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