/EXTERNAL BLUEPRINT/K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs/EXTERNAL-K010481_1798723_2
BACK
SAMPLE K010471_K010472_K010473_K010474_K010475_K010476_K010477_K010478_K010479_K010480_K010481_11_lane_gembs LANE EXTERNAL-K010481_1798723_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 43503540 | 100.00 % | 21751770 | 100.00 % | 21751770 | 100.00 % |
| General Reads | 39599288 | 91.03 % | 20017948 | 92.03 % | 19581340 | 90.02 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 20 | 0.00 % | 8 | 0.00 % | 12 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3904232 | 8.97 % | 1733814 | 7.97 % | 2170418 | 9.98 % |
| Bisulfite_reads C2T | 20471296 | 47.06 % | 10345138 | 47.56 % | 10126158 | 46.55 % |
| Bisulfite_reads G2A | 19128012 | 43.97 % | 9672818 | 44.47 % | 9455194 | 43.47 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 15158985 |
| Average Unique | 69.69 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1160263017 | 35.09 % | 453492549 | 27.43 % | 706770468 | 42.75 % |
| Base Counts Overall C | 462025569 | 13.97 % | 66948149 | 4.05 % | 395077420 | 23.90 % |
| Base Counts Overall G | 485684769 | 14.69 % | 405491860 | 24.53 % | 80192909 | 4.85 % |
| Base Counts Overall T | 1152501311 | 34.86 % | 705135011 | 42.65 % | 447366300 | 27.06 % |
| Base Counts Overall N | 45794374 | 1.39 % | 22066951 | 1.33 % | 23727423 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 18847530 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 21751770 |
| 75 | 21751770 |
Insert Size Plot
| Insert Size Histogram |
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