/EXTERNAL BLUEPRINT/K012022_K012023_K012024_K012025_K012026_K012027_K012028_K012029_K012030_K012031_K012032_11_lane_gembs/EXTERNAL-K012022_1894964_2
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SAMPLE K012022_K012023_K012024_K012025_K012026_K012027_K012028_K012029_K012030_K012031_K012032_11_lane_gembs LANE EXTERNAL-K012022_1894964_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 79280056 | 100.00 % | 39640028 | 100.00 % | 39640028 | 100.00 % |
| General Reads | 67636920 | 85.31 % | 34159496 | 86.17 % | 33477424 | 84.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 27 | 0.00 % | 12 | 0.00 % | 15 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11643109 | 14.69 % | 5480520 | 13.83 % | 6162589 | 15.55 % |
| Bisulfite_reads C2T | 34981915 | 44.12 % | 17662698 | 44.56 % | 17319217 | 43.69 % |
| Bisulfite_reads G2A | 32655032 | 41.19 % | 16496810 | 41.62 % | 16158222 | 40.76 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 25532697 |
| Average Unique | 64.41 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 2082336074 | 34.11 % | 825639087 | 27.05 % | 1256696987 | 41.17 % |
| Base Counts Overall C | 933044055 | 15.28 % | 194930455 | 6.39 % | 738113600 | 24.18 % |
| Base Counts Overall G | 962288789 | 15.76 % | 755514030 | 24.75 % | 206774759 | 6.77 % |
| Base Counts Overall T | 2046912230 | 33.53 % | 1236371156 | 40.51 % | 810541074 | 26.56 % |
| Base Counts Overall N | 79983164 | 1.31 % | 39827428 | 1.30 % | 40155736 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 31670018 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 39640028 |
| 76 | 39640028 |
Insert Size Plot
| Insert Size Histogram |
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