/EXTERNAL BLUEPRINT/K012022_K012023_K012024_K012025_K012026_K012027_K012028_K012029_K012030_K012031_K012032_11_lane_gembs/EXTERNAL-K012029_1894971_2
BACK
SAMPLE K012022_K012023_K012024_K012025_K012026_K012027_K012028_K012029_K012030_K012031_K012032_11_lane_gembs LANE EXTERNAL-K012029_1894971_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 50105794 | 100.00 % | 25052897 | 100.00 % | 25052897 | 100.00 % |
| General Reads | 26161313 | 52.21 % | 13222264 | 52.78 % | 12939049 | 51.65 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 92 | 0.00 % | 49 | 0.00 % | 43 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 23944389 | 47.79 % | 11830584 | 47.22 % | 12113805 | 48.35 % |
| Bisulfite_reads C2T | 13503185 | 26.95 % | 6820905 | 27.23 % | 6682280 | 26.67 % |
| Bisulfite_reads G2A | 12658220 | 25.26 % | 6401408 | 25.55 % | 6256812 | 24.97 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 9928787 |
| Average Unique | 39.63 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1130740231 | 29.31 % | 518424432 | 26.87 % | 612315799 | 31.74 % |
| Base Counts Overall C | 760228110 | 19.70 % | 310638843 | 16.10 % | 449589267 | 23.31 % |
| Base Counts Overall G | 783951558 | 20.32 % | 459746981 | 23.83 % | 324204577 | 16.81 % |
| Base Counts Overall T | 1132672942 | 29.36 % | 615092423 | 31.89 % | 517580519 | 26.83 % |
| Base Counts Overall N | 50553297 | 1.31 % | 25170390 | 1.30 % | 25382907 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 12341657 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 25052897 |
| 76 | 25052897 |
Insert Size Plot
| Insert Size Histogram |
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