/EXTERNAL BLUEPRINT/K012130_1_lane_gembs/EXTERNAL-K012130_1895072_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 147338202 | 100.00 % | 73669101 | 100.00 % | 73669101 | 100.00 % |
| General Reads | 140179081 | 95.14 % | 70427780 | 95.60 % | 69751301 | 94.68 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7159119 | 4.86 % | 3241320 | 4.40 % | 3917799 | 5.32 % |
| Bisulfite_reads C2T | 72537600 | 49.23 % | 36435228 | 49.46 % | 36102372 | 49.01 % |
| Bisulfite_reads G2A | 67641483 | 45.91 % | 33992553 | 46.14 % | 33648930 | 45.68 % |
| Concept | Value |
|---|---|
| Unique Fragments | 52688812 |
| Average Unique | 71.52 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 4043387759 | 35.64 % | 1554982061 | 27.41 % | 2488405698 | 43.87 % |
| Base Counts Overall C | 1579314328 | 13.92 % | 181208378 | 3.19 % | 1398105950 | 24.65 % |
| Base Counts Overall G | 1629088100 | 14.36 % | 1409676294 | 24.85 % | 219411806 | 3.87 % |
| Base Counts Overall T | 3944804478 | 34.77 % | 2452617287 | 43.24 % | 1492187191 | 26.31 % |
| Base Counts Overall N | 148446889 | 1.31 % | 74036757 | 1.31 % | 74410132 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 64942900 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 73669101 |
| 76 | 73669101 |
| Insert Size Histogram |
|---|
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