/EXTERNAL BLUEPRINT/K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs/EXTERNAL-K012120_1895062_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 87073888 | 100.00 % | 43536944 | 100.00 % | 43536944 | 100.00 % |
| General Reads | 80828909 | 92.83 % | 40579098 | 93.21 % | 40249811 | 92.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6244979 | 7.17 % | 2957846 | 6.79 % | 3287133 | 7.55 % |
| Bisulfite_reads C2T | 41774648 | 47.98 % | 20969409 | 48.16 % | 20805239 | 47.79 % |
| Bisulfite_reads G2A | 39054261 | 44.85 % | 19609689 | 45.04 % | 19444572 | 44.66 % |
| Concept | Value |
|---|---|
| Unique Fragments | 31153557 |
| Average Unique | 71.56 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2228006952 | 33.23 % | 931503582 | 27.79 % | 1296503370 | 38.67 % |
| Base Counts Overall C | 1079905188 | 16.11 % | 330597866 | 9.86 % | 749307322 | 22.35 % |
| Base Counts Overall G | 1096923054 | 16.36 % | 756867795 | 22.58 % | 340055259 | 10.14 % |
| Base Counts Overall T | 2211852692 | 32.99 % | 1289314986 | 38.46 % | 922537706 | 27.52 % |
| Base Counts Overall N | 88001490 | 1.31 % | 44060459 | 1.31 % | 43941031 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 38402701 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 43536944 |
| 76 | 43536944 |
| Insert Size Histogram |
|---|
 |