/EXTERNAL BLUEPRINT/K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs/EXTERNAL-K012121_1895063_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22022170 | 100.00 % | 11011085 | 100.00 % | 11011085 | 100.00 % |
| General Reads | 16057221 | 72.91 % | 8070547 | 73.29 % | 7986674 | 72.53 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5964941 | 27.09 % | 2940534 | 26.71 % | 3024407 | 27.47 % |
| Bisulfite_reads C2T | 8303036 | 37.70 % | 4172109 | 37.89 % | 4130927 | 37.52 % |
| Bisulfite_reads G2A | 7754193 | 35.21 % | 3898442 | 35.40 % | 3855751 | 35.02 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6120506 |
| Average Unique | 55.58 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 580797349 | 34.25 % | 220314305 | 25.98 % | 360483044 | 42.52 % |
| Base Counts Overall C | 255452302 | 15.06 % | 40812298 | 4.81 % | 214640004 | 25.32 % |
| Base Counts Overall G | 261577492 | 15.43 % | 217253195 | 25.62 % | 44324297 | 5.23 % |
| Base Counts Overall T | 575619091 | 33.95 % | 358328421 | 42.26 % | 217290670 | 25.63 % |
| Base Counts Overall N | 22260856 | 1.31 % | 11145326 | 1.31 % | 11115530 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7598697 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11011085 |
| 76 | 11011085 |
| Insert Size Histogram |
|---|
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