/EXTERNAL BLUEPRINT/K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs/EXTERNAL-K012122_1895064_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18574558 | 100.00 % | 9287279 | 100.00 % | 9287279 | 100.00 % |
| General Reads | 13192195 | 71.02 % | 6631438 | 71.40 % | 6560757 | 70.64 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5382355 | 28.98 % | 2655837 | 28.60 % | 2726518 | 29.36 % |
| Bisulfite_reads C2T | 6834692 | 36.80 % | 3434880 | 36.98 % | 3399812 | 36.61 % |
| Bisulfite_reads G2A | 6357511 | 34.23 % | 3196562 | 34.42 % | 3160949 | 34.04 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5004306 |
| Average Unique | 53.88 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 475057048 | 33.22 % | 188787805 | 26.40 % | 286269243 | 40.03 % |
| Base Counts Overall C | 228710985 | 15.99 % | 55643155 | 7.78 % | 173067830 | 24.20 % |
| Base Counts Overall G | 235828098 | 16.49 % | 176574432 | 24.69 % | 59253666 | 8.29 % |
| Base Counts Overall T | 471868879 | 32.99 % | 284714343 | 39.81 % | 187154536 | 26.17 % |
| Base Counts Overall N | 18775956 | 1.31 % | 9400748 | 1.31 % | 9375208 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6212267 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9287279 |
| 76 | 9287279 |
| Insert Size Histogram |
|---|
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