/EXTERNAL BLUEPRINT/K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs/EXTERNAL-K012123_1895065_2

BACK

SAMPLE K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs LANE EXTERNAL-K012123_1895065_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 13148962 100.00 % 6574481 100.00 % 6574481 100.00 %
General Reads 10119600 76.96 % 5084394 77.34 % 5035206 76.59 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 4 0.00 % 2 0.00 % 2 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 3029358 23.04 % 1490085 22.66 % 1539273 23.41 %
Bisulfite_reads C2T 5225503 39.74 % 2625123 39.93 % 2600380 39.55 %
Bisulfite_reads G2A 4894101 37.22 % 2459273 37.41 % 2434828 37.03 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 3878731
Average Unique 59.00 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 342211200 33.80 % 133771177 26.42 % 208440023 41.17 %
Base Counts Overall C 156814015 15.49 % 34067974 6.73 % 122746041 24.25 %
Base Counts Overall G 160443256 15.85 % 124334778 24.56 % 36108478 7.13 %
Base Counts Overall T 339711422 33.55 % 207406772 40.97 % 132304650 26.14 %
Base Counts Overall N 13290181 1.31 % 6654336 1.31 % 6635845 1.31 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 4797659



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K012123_1895065_2.mapq.png



Read Length

Read Length Reads
76 6574481
76 6574481



Insert Size Plot

Insert Size Histogram
EXTERNAL-K012123_1895065_2.isize.png