/EXTERNAL BLUEPRINT/K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs/EXTERNAL-K012124_1895066_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 19992280 | 100.00 % | 9996140 | 100.00 % | 9996140 | 100.00 % |
| General Reads | 13101454 | 65.53 % | 6583508 | 65.86 % | 6517946 | 65.20 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6890826 | 34.47 % | 3412632 | 34.14 % | 3478194 | 34.80 % |
| Bisulfite_reads C2T | 6773763 | 33.88 % | 3402973 | 34.04 % | 3370790 | 33.72 % |
| Bisulfite_reads G2A | 6327691 | 31.65 % | 3180535 | 31.82 % | 3147156 | 31.48 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4990666 |
| Average Unique | 49.93 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 524068818 | 34.04 % | 194167984 | 25.23 % | 329900834 | 42.86 % |
| Base Counts Overall C | 234149284 | 15.21 % | 38519575 | 5.00 % | 195629709 | 25.42 % |
| Base Counts Overall G | 241400273 | 15.68 % | 199029010 | 25.86 % | 42371263 | 5.50 % |
| Base Counts Overall T | 519583030 | 33.75 % | 327871009 | 42.60 % | 191712021 | 24.91 % |
| Base Counts Overall N | 20204155 | 1.31 % | 10115202 | 1.31 % | 10088953 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6197772 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9996140 |
| 76 | 9996140 |
| Insert Size Histogram |
|---|
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