/EXTERNAL BLUEPRINT/K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs/EXTERNAL-K012125_1895067_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 12452424 | 100.00 % | 6226212 | 100.00 % | 6226212 | 100.00 % |
| General Reads | 8493049 | 68.20 % | 4266957 | 68.53 % | 4226092 | 67.88 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3959375 | 31.80 % | 1959255 | 31.47 % | 2000120 | 32.12 % |
| Bisulfite_reads C2T | 4391627 | 35.27 % | 2205938 | 35.43 % | 2185689 | 35.10 % |
| Bisulfite_reads G2A | 4101422 | 32.94 % | 2061019 | 33.10 % | 2040403 | 32.77 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3253015 |
| Average Unique | 52.25 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 324948615 | 33.89 % | 124138128 | 25.89 % | 200810487 | 41.89 % |
| Base Counts Overall C | 147194882 | 15.35 % | 28137510 | 5.87 % | 119057372 | 24.83 % |
| Base Counts Overall G | 151902439 | 15.84 % | 121441358 | 25.33 % | 30461081 | 6.35 % |
| Base Counts Overall T | 322205806 | 33.60 % | 199400574 | 41.59 % | 122805232 | 25.62 % |
| Base Counts Overall N | 12584906 | 1.31 % | 6300754 | 1.31 % | 6284152 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4025497 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 6226212 |
| 76 | 6226212 |
| Insert Size Histogram |
|---|
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