/EXTERNAL BLUEPRINT/K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs/EXTERNAL-K012126_1895068_2

BACK

SAMPLE K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs LANE EXTERNAL-K012126_1895068_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 20950806 100.00 % 10475403 100.00 % 10475403 100.00 %
General Reads 13404491 63.98 % 6735859 64.30 % 6668632 63.66 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 37 0.00 % 17 0.00 % 20 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 7546278 36.02 % 3739527 35.70 % 3806751 36.34 %
Bisulfite_reads C2T 6927754 33.07 % 3480417 33.22 % 3447337 32.91 %
Bisulfite_reads G2A 6476774 30.91 % 3255459 31.08 % 3221315 30.75 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 5116598
Average Unique 48.84 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 527430749 32.69 % 207449845 25.72 % 319980904 39.67 %
Base Counts Overall C 265554774 16.46 % 69778765 8.65 % 195776009 24.27 %
Base Counts Overall G 272901984 16.92 % 198879910 24.66 % 74022074 9.18 %
Base Counts Overall T 526146769 32.61 % 319894896 39.66 % 206251873 25.57 %
Base Counts Overall N 21177786 1.31 % 10602615 1.31 % 10575171 1.31 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 6324150



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K012126_1895068_2.mapq.png



Read Length

Read Length Reads
76 10475403
76 10475403



Insert Size Plot

Insert Size Histogram
EXTERNAL-K012126_1895068_2.isize.png