/EXTERNAL BLUEPRINT/K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs/EXTERNAL-K012127_1895069_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 19126696 | 100.00 % | 9563348 | 100.00 % | 9563348 | 100.00 % |
| General Reads | 14326262 | 74.90 % | 7199910 | 75.29 % | 7126352 | 74.52 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4800432 | 25.10 % | 2363437 | 24.71 % | 2436995 | 25.48 % |
| Bisulfite_reads C2T | 7394601 | 38.66 % | 3715499 | 38.85 % | 3679102 | 38.47 % |
| Bisulfite_reads G2A | 6931663 | 36.24 % | 3484412 | 36.44 % | 3447251 | 36.05 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5545353 |
| Average Unique | 57.99 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 482961634 | 32.79 % | 197860160 | 26.87 % | 285101474 | 38.72 % |
| Base Counts Overall C | 241363079 | 16.39 % | 68236871 | 9.27 % | 173126208 | 23.51 % |
| Base Counts Overall G | 246790377 | 16.76 % | 175431498 | 23.82 % | 71358879 | 9.69 % |
| Base Counts Overall T | 482293254 | 32.75 % | 285162745 | 38.73 % | 197130509 | 26.77 % |
| Base Counts Overall N | 19347248 | 1.31 % | 9686522 | 1.32 % | 9660726 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6832731 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9563348 |
| 76 | 9563348 |
| Insert Size Histogram |
|---|
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