/EXTERNAL BLUEPRINT/K012120_K012121_K012122_K012123_K012124_K012125_K012126_K012127_K012128_9_lane_gembs/EXTERNAL-K012128_1895070_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 40540662 | 100.00 % | 20270331 | 100.00 % | 20270331 | 100.00 % |
| General Reads | 37322289 | 92.06 % | 18765859 | 92.58 % | 18556430 | 91.54 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3218371 | 7.94 % | 1504471 | 7.42 % | 1713900 | 8.46 % |
| Bisulfite_reads C2T | 19236504 | 47.45 % | 9670232 | 47.71 % | 9566272 | 47.19 % |
| Bisulfite_reads G2A | 18085787 | 44.61 % | 9095628 | 44.87 % | 8990159 | 44.35 % |
| Concept | Value |
|---|---|
| Unique Fragments | 14593402 |
| Average Unique | 71.99 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1021822233 | 32.73 % | 444745899 | 28.49 % | 577076334 | 36.97 % |
| Base Counts Overall C | 514435836 | 16.48 % | 168582425 | 10.80 % | 345853411 | 22.16 % |
| Base Counts Overall G | 526194210 | 16.86 % | 351619693 | 22.53 % | 174574517 | 11.18 % |
| Base Counts Overall T | 1018211723 | 32.62 % | 575356446 | 36.86 % | 442855277 | 28.37 % |
| Base Counts Overall N | 40966972 | 1.31 % | 20511024 | 1.31 % | 20455948 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 17834525 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 20270331 |
| 76 | 20270331 |
| Insert Size Histogram |
|---|
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