/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012048_1894990_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14735810 | 100.00 % | 7367905 | 100.00 % | 7367905 | 100.00 % |
| General Reads | 11523838 | 78.20 % | 5851727 | 79.42 % | 5672111 | 76.98 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 13 | 0.00 % | 8 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3211959 | 21.80 % | 1516170 | 20.58 % | 1695789 | 23.02 % |
| Bisulfite_reads C2T | 5951854 | 40.39 % | 3020981 | 41.00 % | 2930873 | 39.78 % |
| Bisulfite_reads G2A | 5571997 | 37.81 % | 2830754 | 38.42 % | 2741243 | 37.21 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4446343 |
| Average Unique | 60.35 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 367678117 | 32.40 % | 154476788 | 27.23 % | 213201329 | 37.58 % |
| Base Counts Overall C | 187539458 | 16.53 % | 54593458 | 9.62 % | 132946000 | 23.43 % |
| Base Counts Overall G | 195329856 | 17.21 % | 136744503 | 24.10 % | 58585353 | 10.33 % |
| Base Counts Overall T | 369280883 | 32.55 % | 214092699 | 37.74 % | 155188184 | 27.35 % |
| Base Counts Overall N | 14829056 | 1.31 % | 7421237 | 1.31 % | 7407819 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5488433 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7367905 |
| 76 | 7367905 |
| Insert Size Histogram |
|---|
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