/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012049_1894991_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 15219486 | 100.00 % | 7609743 | 100.00 % | 7609743 | 100.00 % |
| General Reads | 10483932 | 68.88 % | 5319205 | 69.90 % | 5164727 | 67.87 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4735550 | 31.12 % | 2290536 | 30.10 % | 2445014 | 32.13 % |
| Bisulfite_reads C2T | 5395489 | 35.45 % | 2736486 | 35.96 % | 2659003 | 34.94 % |
| Bisulfite_reads G2A | 5088447 | 33.43 % | 2582721 | 33.94 % | 2505726 | 32.93 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4070933 |
| Average Unique | 53.50 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 342745856 | 29.25 % | 161226407 | 27.52 % | 181519449 | 30.98 % |
| Base Counts Overall C | 230175860 | 19.64 % | 100181532 | 17.10 % | 129994328 | 22.19 % |
| Base Counts Overall G | 237697651 | 20.28 % | 133159947 | 22.73 % | 104537704 | 17.84 % |
| Base Counts Overall T | 345958493 | 29.52 % | 183713354 | 31.35 % | 162245139 | 27.69 % |
| Base Counts Overall N | 15322562 | 1.31 % | 7668971 | 1.31 % | 7653591 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5005683 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7609743 |
| 76 | 7609743 |
| Insert Size Histogram |
|---|
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