/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012050_1894992_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14891442 | 100.00 % | 7445721 | 100.00 % | 7445721 | 100.00 % |
| General Reads | 11476044 | 77.06 % | 5828415 | 78.28 % | 5647629 | 75.85 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3415398 | 22.94 % | 1617306 | 21.72 % | 1798092 | 24.15 % |
| Bisulfite_reads C2T | 5923575 | 39.78 % | 3007499 | 40.39 % | 2916076 | 39.16 % |
| Bisulfite_reads G2A | 5552469 | 37.29 % | 2820916 | 37.89 % | 2731553 | 36.69 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4448735 |
| Average Unique | 59.75 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 373756298 | 32.60 % | 154495761 | 26.95 % | 219260537 | 38.24 % |
| Base Counts Overall C | 187250341 | 16.33 % | 51544163 | 8.99 % | 135706178 | 23.67 % |
| Base Counts Overall G | 194164717 | 16.93 % | 138885210 | 24.22 % | 55279507 | 9.64 % |
| Base Counts Overall T | 376479858 | 32.83 % | 220893193 | 38.53 % | 155586665 | 27.14 % |
| Base Counts Overall N | 14989820 | 1.31 % | 7502190 | 1.31 % | 7487630 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5478191 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7445721 |
| 76 | 7445721 |
| Insert Size Histogram |
|---|
 |