/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012051_1894993_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 15660018 | 100.00 % | 7830009 | 100.00 % | 7830009 | 100.00 % |
| General Reads | 9984914 | 63.76 % | 5065691 | 64.70 % | 4919223 | 62.83 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 1 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5675101 | 36.24 % | 2764317 | 35.30 % | 2910784 | 37.17 % |
| Bisulfite_reads C2T | 5139452 | 32.82 % | 2606603 | 33.29 % | 2532849 | 32.35 % |
| Bisulfite_reads G2A | 4845465 | 30.94 % | 2459089 | 31.41 % | 2386376 | 30.48 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3843429 |
| Average Unique | 49.09 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 357709074 | 29.67 % | 164675806 | 27.31 % | 193033268 | 32.02 % |
| Base Counts Overall C | 232029879 | 19.24 % | 94771219 | 15.72 % | 137258660 | 22.77 % |
| Base Counts Overall G | 241076621 | 19.99 % | 141159322 | 23.41 % | 99917299 | 16.57 % |
| Base Counts Overall T | 359241548 | 29.79 % | 194414672 | 32.25 % | 164826876 | 27.34 % |
| Base Counts Overall N | 15764264 | 1.31 % | 7889674 | 1.31 % | 7874590 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4750282 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7830009 |
| 76 | 7830009 |
| Insert Size Histogram |
|---|
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