/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012052_1894994_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14765932 | 100.00 % | 7382966 | 100.00 % | 7382966 | 100.00 % |
| General Reads | 8793013 | 59.55 % | 4463644 | 60.46 % | 4329369 | 58.64 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 1 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5972916 | 40.45 % | 2919321 | 39.54 % | 3053595 | 41.36 % |
| Bisulfite_reads C2T | 4525368 | 30.65 % | 2296692 | 31.11 % | 2228676 | 30.19 % |
| Bisulfite_reads G2A | 4267648 | 28.90 % | 2166953 | 29.35 % | 2100695 | 28.45 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3376523 |
| Average Unique | 45.73 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 331966165 | 29.20 % | 152948931 | 26.90 % | 179017234 | 31.49 % |
| Base Counts Overall C | 224137985 | 19.71 % | 93975032 | 16.53 % | 130162953 | 22.90 % |
| Base Counts Overall G | 231377874 | 20.35 % | 133093104 | 23.41 % | 98284770 | 17.29 % |
| Base Counts Overall T | 334628389 | 29.43 % | 181030329 | 31.84 % | 153598060 | 27.02 % |
| Base Counts Overall N | 14866351 | 1.31 % | 7440986 | 1.31 % | 7425365 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4177159 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7382966 |
| 76 | 7382966 |
| Insert Size Histogram |
|---|
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