/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012053_1894995_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 15774946 | 100.00 % | 7887473 | 100.00 % | 7887473 | 100.00 % |
| General Reads | 9834119 | 62.34 % | 4985025 | 63.20 % | 4849094 | 61.48 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 14 | 0.00 % | 7 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5940813 | 37.66 % | 2902441 | 36.80 % | 3038372 | 38.52 % |
| Bisulfite_reads C2T | 5064308 | 32.10 % | 2566388 | 32.54 % | 2497920 | 31.67 % |
| Bisulfite_reads G2A | 4769825 | 30.24 % | 2418644 | 30.66 % | 2351181 | 29.81 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3792311 |
| Average Unique | 48.08 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 351805876 | 28.96 % | 163407465 | 26.91 % | 188398411 | 31.02 % |
| Base Counts Overall C | 242294008 | 19.95 % | 103745271 | 17.08 % | 138548737 | 22.81 % |
| Base Counts Overall G | 250166104 | 20.60 % | 141916884 | 23.37 % | 108249220 | 17.82 % |
| Base Counts Overall T | 354526755 | 29.19 % | 190319988 | 31.34 % | 164206767 | 27.04 % |
| Base Counts Overall N | 15878099 | 1.31 % | 7945813 | 1.31 % | 7932286 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4682884 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7887473 |
| 76 | 7887473 |
| Insert Size Histogram |
|---|
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