/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012054_1894996_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 15302440 | 100.00 % | 7651220 | 100.00 % | 7651220 | 100.00 % |
| General Reads | 10939663 | 71.49 % | 5549423 | 72.53 % | 5390240 | 70.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5 | 0.00 % | 3 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4362772 | 28.51 % | 2101794 | 27.47 % | 2260978 | 29.55 % |
| Bisulfite_reads C2T | 5641594 | 36.87 % | 2861052 | 37.39 % | 2780542 | 36.34 % |
| Bisulfite_reads G2A | 5298074 | 34.62 % | 2688374 | 35.14 % | 2609700 | 34.11 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4233992 |
| Average Unique | 55.34 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 368330972 | 31.26 % | 161164595 | 27.36 % | 207166377 | 35.16 % |
| Base Counts Overall C | 207902379 | 17.64 % | 71240407 | 12.09 % | 136661972 | 23.20 % |
| Base Counts Overall G | 216053759 | 18.34 % | 140071826 | 23.78 % | 75981933 | 12.90 % |
| Base Counts Overall T | 370598886 | 31.45 % | 208959590 | 35.47 % | 161639296 | 27.44 % |
| Base Counts Overall N | 15401884 | 1.31 % | 7707522 | 1.31 % | 7694362 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5225808 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7651220 |
| 76 | 7651220 |
| Insert Size Histogram |
|---|
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