/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012055_1894997_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14371748 | 100.00 % | 7185874 | 100.00 % | 7185874 | 100.00 % |
| General Reads | 10494108 | 73.02 % | 5322784 | 74.07 % | 5171324 | 71.97 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 1 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3877639 | 26.98 % | 1863089 | 25.93 % | 2014550 | 28.03 % |
| Bisulfite_reads C2T | 5403577 | 37.60 % | 2739625 | 38.13 % | 2663952 | 37.07 % |
| Bisulfite_reads G2A | 5090532 | 35.42 % | 2583160 | 35.95 % | 2507372 | 34.89 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4065046 |
| Average Unique | 56.57 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 335007431 | 30.27 % | 155384400 | 28.08 % | 179623031 | 32.46 % |
| Base Counts Overall C | 206742739 | 18.68 % | 85065935 | 15.37 % | 121676804 | 21.99 % |
| Base Counts Overall G | 213902548 | 19.33 % | 124977160 | 22.59 % | 88925388 | 16.07 % |
| Base Counts Overall T | 336506356 | 30.41 % | 180645718 | 32.65 % | 155860638 | 28.17 % |
| Base Counts Overall N | 14465522 | 1.31 % | 7239085 | 1.31 % | 7226437 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5014316 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7185874 |
| 76 | 7185874 |
| Insert Size Histogram |
|---|
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